Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835823.1_cds_XP_016506046.1_19315
CDS Infomation

[gene=LOC107823860] [db_xref=GeneID:107823860] [protein=nematode resistance protein-like HSPRO2] [protein_id=XP_016506046.1] [location=7000..8436] [gbkey=CDS]
Sequence

ATGGTTGATTACGATAGAAAGACAAAGATGATATCCTCTGATATAACTAGCAAATCGCCG
AGGATTTCAAATAAGCTTCAAATTTCAATACCAGCTGCGGCACCTATTCGGCTGACGGAG
CTGTCGGCGGCGTCTGATTCAGCTTGTTCAGCTTACGAACACTACCTCAGGCTACCGGAG
CTGAAGAAGATGTGGAGCTCTGGAGAATTTCCGAGTTGGAAGAATGAATCGTTGCTCAAA
CCGGCTTTGCAAGGTTTGGAAACGACTTTTCGGTTCGTTTCTATTGTGTTGTCTGATCCT
AGACCGTATGCGAACCGGAGAGAATGGAAGCGGAGGCTTGAATCGTTGGCGATGGATCAG
ATTGAAATCATATCTCTGTTGTGCGAAGATGAAGAAGAGGATCCAGAGACCCGTGGAACG
GCTCCCGTCGGTGACCTCACGTCGTCAACTAGTGTATTGGCTCGTCACAACAGTTCAGCG
GAGGTGTGGAAGCTTTCTGATGAGACGACGGTTGTCAGCCAGACGAGTGAGGCCAGCTTG
TTGCCTCGTCTCGCAGCTTGGCAAAAGTCCGAAGACATAGCGCAGAAGATTATGTATTCC
ATTGAATGTGAAATGAGGAGGTGTCCATACACTCTCGGATTAGGCGAGCCGAATCTGAGC
GGCAAGCCCAGCCTTGAATATGACGCAGTAGTCAAGCCATCGGAACTTCACGCTCTGAAG
AAAAGCCCCTCCGATCGCATGAATTTGGACAATTTCGAAAACCGAACGCTGTACACGACA
CACCAGATCCTCGAAACATGGATCTACGCGTCAAAAATGCTTTTGAAGAGAATCGCTGAG
AGAATCGATCGCAAAGACTACGAAAAAGCCGTTAACGACTGCTGGTTACTGGAGAAAACG
TGGAAACTCCTAATCGAAATCGAAGACCTTCACTTGCTGATGGATCCAGATGATTTTCTA
CGCCTAAAAAACCAATTATCCATCAAAGCAACTGCCGAATCGGAGCTATTTTGCTTCCGA
TCCAAAGGACTCGTTGAAATTACCAAACTATCCAAGGATCTAAAACACAAAGTGCCGAAC
ATTCTAGACGTAGAGGTAGATCCCCAGGGGGGACCAAGAATTCAAGAGGCAGCCATGGAT
TTGTTCAGGAAAAAGGAAAGCTTCGAGAAGATTCACTTGCTTCAAGCTTTACAAGCAATT
GAAATGGCAGTGAAGAGATTCTACTATTCGTATAAGCAGTTGTTAGTAATTGTTATGGGG
AGTTTAGAAGCTAAAGGGAACACAAAATTTATGGCCGTTGACACAAGCGATGCATTGGCT
CAGATCTTCCTTGAGCCGACGTATTTTCCTAGTTTGGATGCTGCAAAAACTTTTCTAGGA
GAACATTGGAGTCATGAGCATGGGAAATATAGTCCAGAGAGAAGTAACAAGGCCTAA

Peptide Sequence

PEP ID

XP_016506046.1
PEP Infomation

PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tabacum]
Sequence

MVDYDRKTKMISSDITSKSPRISNKLQISIPAAAPIRLTELSAASDSACSAYEHYLRLPE
LKKMWSSGEFPSWKNESLLKPALQGLETTFRFVSIVLSDPRPYANRREWKRRLESLAMDQ
IEIISLLCEDEEEDPETRGTAPVGDLTSSTSVLARHNSSAEVWKLSDETTVVSQTSEASL
LPRLAAWQKSEDIAQKIMYSIECEMRRCPYTLGLGEPNLSGKPSLEYDAVVKPSELHALK
KSPSDRMNLDNFENRTLYTTHQILETWIYASKMLLKRIAERIDRKDYEKAVNDCWLLEKT
WKLLIEIEDLHLLMDPDDFLRLKNQLSIKATAESELFCFRSKGLVEITKLSKDLKHKVPN
ILDVEVDPQGGPRIQEAAMDLFRKKESFEKIHLLQALQAIEMAVKRFYYSYKQLLVIVMG
SLEAKGNTKFMAVDTSDALAQIFLEPTYFPSLDAAKTFLGEHWSHEHGKYSPERSNKA

Transcript Sequence

Gene sequence data has not been registered.